Gene detail information of Glyur000400s00020168.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRATCG01250.15.00E-74NADH-Ubiquinone/plastoquinone (complex I) protein
NRAHY80585.10NADH-plastoquinone oxidoreductase subunit 2 [Beta vulgaris subsp. vulgaris]
COGYP_007067934.12.00E-63NADH dehydrogenase subunit N [Calothrix sp. PCC 7507]
Swissprottr|P0CC48|NU2C1_COFAR0NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic {ECO:0000255|HAMAP-Rule:MF_00445}
trEMBLtr|A0A023ZQY2|A0A023ZQY2_BETVU0NADH-plastoquinone oxidoreductase subunit 2 {ECO:0000313|EMBL:AHY80585.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004009739598494+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05573ndhB EC:1.6.5.3 Oxidative phosphorylation map00190


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000400s00020168.1PF00361.15Oxidored_q11592759.30E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.989
SRR1783600control10.046
SRR1783602moderate drought stress7.901
SRR1811619moderate drought stress7.661

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.215
DRR006520Root Summer glycyrrhizin high producing strain5.113
DRR006521Root Winter glycyrrhizin high producing strain4.638
DRR006522Root Winter glycyrrhizin high producing strain4.866
DRR006523Root Summer glycyrrhizin low producing strain8.107
DRR006524Root Summer glycyrrhizin low producing strain8.291
DRR006525Leaf Summer glycyrrhizin high producing strain14.135
DRR006526Leaf Summer glycyrrhizin high producing strain14.499

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.134
SRR2868004Drought Stress(Tissue:root)1.268
SRR2967015Control (Tissue:root)1.221

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.122
SRR9715740Leave2.425
SRR9715741Leave4.243
SRR9715739Root34.397
SRR9715742Root9.292
SRR9715743Root14.160

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.065
SRR8749028MeJA induced 9h0.793
SRR8749029MeJA induced 9h0.795
SRR8749030Uninduced0.639
SRR8749031Uninduced0.448
SRR8749032Uninduced0.440

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.864
SRR8400027Control-Root1.127

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved