Gene detail information of Glyur000400s00020169.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRATCG01250.18.00E-59NADH-Ubiquinone/plastoquinone (complex I) protein
NRXP_010430929.12.14E-111PREDICTED: NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic, partial [Camelina sativa]
COGNP_440041.11.00E-59NAD(P)H-quinone oxidoreductase subunit 2 [Synechocystis sp. PCC 6803]
Swissprottr|P0CD57|NU2C2_VITVI6.00E-100NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic {ECO:0000255|HAMAP-Rule:MF_00445}
trEMBLtr|M7YUH3|M7YUH3_TRIUA4.00E-105Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_00336-P1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004009888399670+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05573ndhB EC:1.6.5.3 Oxidative phosphorylation map00190


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000400s00020169.1PF00361.15Oxidored_q1211749.30E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.364
SRR1783600control4.137
SRR1783602moderate drought stress2.443
SRR1811619moderate drought stress2.834

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.653
DRR006520Root Summer glycyrrhizin high producing strain1.730
DRR006521Root Winter glycyrrhizin high producing strain2.045
DRR006522Root Winter glycyrrhizin high producing strain1.543
DRR006523Root Summer glycyrrhizin low producing strain4.178
DRR006524Root Summer glycyrrhizin low producing strain3.996
DRR006525Leaf Summer glycyrrhizin high producing strain9.155
DRR006526Leaf Summer glycyrrhizin high producing strain9.120

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.000
SRR2868004Drought Stress(Tissue:root)0.628
SRR2967015Control (Tissue:root)0.648

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.590
SRR9715740Leave2.105
SRR9715741Leave4.326
SRR9715739Root17.864
SRR9715742Root5.427
SRR9715743Root10.815

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.191
SRR8749028MeJA induced 9h0.380
SRR8749029MeJA induced 9h0.540
SRR8749030Uninduced0.640
SRR8749031Uninduced0.306
SRR8749032Uninduced0.768

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.591
SRR8400027Control-Root0.668

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved