Gene detail information of Glyur000400s00020171.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G32180.10pantothenate kinase 2
NRXP_004501924.10PREDICTED: pantothenate kinase 2-like isoform X1 [Cicer arietinum]
COGYP_005445654.14.00E-44hypothetical protein PSMK_15980 [Phycisphaera mikurensis NBRC 102666]
Swissprottr|Q8L5Y9|PANK2_ARATH0Pantothenate kinase 2
trEMBLtr|V7AWN9|V7AWN9_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW10067.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00400116052128823-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09680coaW EC:2.7.1.33 Pantothenate and CoA biosynthesis map00770


Gene Ontology

biological_process

GO:0015937  coenzyme A biosynthetic process


molecular_function

GO:0004594  pantothenate kinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000400s00020171.1PF03630.9Fumble933618.40E-101
Glyur000400s00020171.1PF01937.14DUF895748512.10E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.023
SRR1783600control4.074
SRR1783602moderate drought stress5.682
SRR1811619moderate drought stress5.738

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.974
DRR006520Root Summer glycyrrhizin high producing strain8.651
DRR006521Root Winter glycyrrhizin high producing strain6.776
DRR006522Root Winter glycyrrhizin high producing strain6.788
DRR006523Root Summer glycyrrhizin low producing strain10.761
DRR006524Root Summer glycyrrhizin low producing strain11.176
DRR006525Leaf Summer glycyrrhizin high producing strain8.004
DRR006526Leaf Summer glycyrrhizin high producing strain7.824

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.724
SRR2868004Drought Stress(Tissue:root)21.728
SRR2967015Control (Tissue:root)23.922

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.636
SRR9715740Leave14.455
SRR9715741Leave16.679
SRR9715739Root4.981
SRR9715742Root16.053
SRR9715743Root13.948

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.307
SRR8749028MeJA induced 9h4.670
SRR8749029MeJA induced 9h1.578
SRR8749030Uninduced1.596
SRR8749031Uninduced0.605
SRR8749032Uninduced0.920

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.713
SRR8400027Control-Root15.732

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved