Gene detail information of Glyur000402s00033324.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G29090.2 | 9.00E-131 | cytochrome P450, family 707, subfamily A, polypeptide 2 |
| NR | KEH40924.1 | 0 | cytochrome P450 family ABA 8'-hydroxylase [Medicago truncatula] |
| COG | YP_001659897.1 | 2.00E-53 | cytochrome P450 [Microcystis aeruginosa NIES-843] |
| Swissprot | tr|O81077|ABAH2_ARATH | 1.00E-171 | Abscisic acid 8'-hydroxylase 2 |
| trEMBL | tr|A0A072VFZ6|A0A072VFZ6_MEDTR | 0 | Cytochrome P450 family ABA 8'-hydroxylase {ECO:0000313|EMBL:KEH40924.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00402 | 102488 | 114419 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP707A2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K09843 | E1.14.13.93 | EC:1.14.13.93 | Carotenoid biosynthesis | map00906 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000402s00033324.1 | PF00067.17 | p450 | 57 | 324 | 3.80E-26 |
| Glyur000402s00033324.1 | PF00067.17 | p450 | 331 | 367 | 9.50E-06 |
| Glyur000402s00033324.1 | PF00067.17 | p450 | 370 | 411 | 3.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.055 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.012 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.609 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.026 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 24.908 |
| SRR9715740 | Leave | 45.346 |
| SRR9715741 | Leave | 17.365 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.579 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.035 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.000 |