Gene detail information of Glyur000403s00026490.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G43240.10ARID/BRIGHT DNA-binding domain-containing protein
NRXP_004488153.10PREDICTED: AT-rich interactive domain-containing protein 4-like isoform X2 [Cicer arietinum]
Swissprottr|Q6NQ79|ARID4_ARATH0AT-rich interactive domain-containing protein 4
trEMBLtr|I1L1V4|I1L1V4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G08690.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00403124744131050-


Gene family

Gene familysubfamily
Transcription Factors FamilyARID


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000403s00026490.1PF01388.16ARID5936916.70E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.582
SRR1783600control13.580
SRR1783602moderate drought stress17.345
SRR1811619moderate drought stress17.017

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.218
DRR006520Root Summer glycyrrhizin high producing strain20.976
DRR006521Root Winter glycyrrhizin high producing strain11.891
DRR006522Root Winter glycyrrhizin high producing strain11.593
DRR006523Root Summer glycyrrhizin low producing strain12.954
DRR006524Root Summer glycyrrhizin low producing strain12.973
DRR006525Leaf Summer glycyrrhizin high producing strain9.941
DRR006526Leaf Summer glycyrrhizin high producing strain9.843

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.696
SRR2868004Drought Stress(Tissue:root)33.737
SRR2967015Control (Tissue:root)34.363

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.201
SRR9715740Leave14.592
SRR9715741Leave15.922
SRR9715739Root6.160
SRR9715742Root20.205
SRR9715743Root17.041

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.806
SRR8749028MeJA induced 9h27.187
SRR8749029MeJA induced 9h16.276
SRR8749030Uninduced21.734
SRR8749031Uninduced21.079
SRR8749032Uninduced20.692

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.891
SRR8400027Control-Root30.382

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved