Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000404s00017738.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G64980.1	3.00E-24
NR	XP_007144615.1	1.10E-180	hypothetical protein PHAVU_007G170200g [Phaseolus vulgaris]
Swissprot	tr\|Q8S3D5\|BH069_ARATH	1.00E-22	Transcription factor bHLH69
trEMBL	tr\|V7BFG9\|V7BFG9_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW16609.1}

Sequence

Transcript Sequence

>Glyur000404s00017738.1
ATGGAAGGACAAAGTAACAAAGAGAACAGTGTAGAGCAGCAAGTGTGTTGTGACACTGGAGGAACCAGCAATGATGTCTCTTCTTATTCAGCTGAGGATCCTCTAATTCCAAACCCAAAATTTGTCATTTCAGCATCATCTGGAAGGAATGGGAGCCAGTGGACTTGCCTTCCAACAAAACCATCTCATAATTATGTTGAATATCTTTCAGAATCCTCAACTTATCTGCCAAACACTACTTCAACCGATTATATGATTGGGAGCAGTTATCTACCAGTTGGTAGCAGCATCAATATTGATGGTAACCGGGTCAATATTGGAACAGACAGAAACTTCTTTTNCAATGATCCAGGAAGAGCTTGTGGTTTTAAACCCATTGATTCTTCAAGTAATGACTTTGACATTAGGAAGCGTGTGGGGTTTTGGAGACCTGATGAAGGAGAGGAAGCTGCAATTAAAGTTGAATCTGAAAGGAGTGAAAATCTTGTTTATGCTGAGAGTCATGGTGCATGGACAGCAGATTCAGGAGGAGTAGATAAGCACAATGCTTCACGACTTGATCCAATGGTGATGGTTGGTGCACCNGCTTTCCTTCCAAAACCAGGATGCAGCTCCTCCTCAAAACAGAAAAGTGAGAAAACACGTGTCACCGACCGTCAACGCAGGCAACGTATCAATGAAAACCTCAAAGCCTTACACGAATTGCTTCCAAATCCAGCAGAGGGTAGTCAAGCGTACGTACTGGACGATATCATTGACTATGTTAAATACTTGCAGCTTCAAATNAAGGAACTAAGCGGAAGTAGATTGCAAGCTGACTCAAATGCTATACCACTAGTTTTTCATGAGGGTTACGGCCATTATATTAACCAACAGATGCTAAATGAACCCCTTGAAGAGATAATGGGGAAACTACTTGAAGAGCATTCAGCAGCAGCCATTCAGCTGCTTGAAAGCAAGGGTCTTTTCCTGCTGCCCATTGCTTTGGGGGATGACTTGAGCGAAGCTATGCAATTGTTTGGTGGGAGTGCACTTGGCTGATAATTAAAAGCTTTGTTTATTGTATTTTAAATTCTCTATTCTCTATTATGGTGATATCTATCTATGTTTAGTGTTTGGATAATTTCTACAGGACGCATAGTATGAGAACCAAATT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00404	90042	92208	-

Gene family

Gene family	subfamily
Transcription Factors Family	bHLH

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0046983 protein dimerization activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000404s00017738.1	PF00010.21	HLH	216	259	1.40E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.316
SRR1783600	control	0.339
SRR1783602	moderate drought stress	0.098
SRR1811619	moderate drought stress	0.079

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.125
DRR006520	Root Summer glycyrrhizin high producing strain	1.114
DRR006521	Root Winter glycyrrhizin high producing strain	0.123
DRR006522	Root Winter glycyrrhizin high producing strain	0.187
DRR006523	Root Summer glycyrrhizin low producing strain	1.767
DRR006524	Root Summer glycyrrhizin low producing strain	1.915
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.401
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.539

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.802
SRR2868004	Drought Stress(Tissue:root)	1.457
SRR2967015	Control (Tissue:root)	0.538

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.943
SRR9715740	Leave	0.274
SRR9715741	Leave	0.481
SRR9715739	Root	0.020
SRR9715742	Root	0.972
SRR9715743	Root	0.169

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.143
SRR8749028	MeJA induced 9h	0.424
SRR8749029	MeJA induced 9h	0.184
SRR8749030	Uninduced	1.100
SRR8749031	Uninduced	0.993
SRR8749032	Uninduced	0.364

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.265
SRR8400027	Control-Root	0.427