Gene detail information of Glyur000405s00021262.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G67190.12.00E-35DREB and EAR motif protein 2
NRAHI96435.11.81E-73DREB group protein [Ammopiptanthus mongolicus]
Swissprottr|Q8LC30|RAP21_ARATH3.00E-50Ethylene-responsive transcription factor RAP2-1
trEMBLtr|W6D834|W6D834_9FABA7.00E-74DREB group protein {ECO:0000313|EMBL:AHI96435.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0040599557100081-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF
EAR motif-containing ProteinsERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000405s00021262.1PF00847.15AP235844.00E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control43.722
SRR1783600control43.748
SRR1783602moderate drought stress66.040
SRR1811619moderate drought stress66.877

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain213.684
DRR006520Root Summer glycyrrhizin high producing strain213.714
DRR006521Root Winter glycyrrhizin high producing strain1964.430
DRR006522Root Winter glycyrrhizin high producing strain1951.527
DRR006523Root Summer glycyrrhizin low producing strain357.559
DRR006524Root Summer glycyrrhizin low producing strain379.010
DRR006525Leaf Summer glycyrrhizin high producing strain120.862
DRR006526Leaf Summer glycyrrhizin high producing strain118.336

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)48.421
SRR2868004Drought Stress(Tissue:root)82.013
SRR2967015Control (Tissue:root)79.156

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave108.070
SRR9715740Leave205.883
SRR9715741Leave153.848
SRR9715739Root27.439
SRR9715742Root58.172
SRR9715743Root50.118

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.961
SRR8749028MeJA induced 9h69.706
SRR8749029MeJA induced 9h23.346
SRR8749030Uninduced35.850
SRR8749031Uninduced56.362
SRR8749032Uninduced45.738

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.507
SRR8400027Control-Root34.654

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved