Gene detail information of Glyur000406s00019715.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G02580.18.00E-125NADH-ubiquinone oxidoreductase 24 kDa subunit, putative
NRXP_004486648.17.17E-171PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial-like isoform X3 [Cicer arietinum]
COGYP_006371396.16.00E-54NADH dehydrogenase I subunit E [Tistrella mobilis KA081020-065]
Swissprottr|O22769|NDUV2_ARATH1.00E-157NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (Precursor)
trEMBLtr|I1M5V6|I1M5V6_SOYBN2.00E-168Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G44380.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004062428130105-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03943NDUFV2 EC:1.6.5.3 1.6.99.3 Oxidative phosphorylation map00190
Alzheimer's diseasemap05010
Parkinson's diseasemap05012
Huntington's diseasemap05016
Non-alcoholic fatty liver disease (NAFLD)map04932


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000406s00019715.1PF01257.142Fe-2S_thioredx532031.30E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control116.441
SRR1783600control117.641
SRR1783602moderate drought stress128.172
SRR1811619moderate drought stress127.684

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain130.121
DRR006520Root Summer glycyrrhizin high producing strain125.297
DRR006521Root Winter glycyrrhizin high producing strain77.236
DRR006522Root Winter glycyrrhizin high producing strain70.103
DRR006523Root Summer glycyrrhizin low producing strain91.737
DRR006524Root Summer glycyrrhizin low producing strain91.619
DRR006525Leaf Summer glycyrrhizin high producing strain101.441
DRR006526Leaf Summer glycyrrhizin high producing strain99.858

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)185.845
SRR2868004Drought Stress(Tissue:root)141.704
SRR2967015Control (Tissue:root)130.100

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave117.827
SRR9715740Leave108.662
SRR9715741Leave94.252
SRR9715739Root120.934
SRR9715742Root116.071
SRR9715743Root119.186

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h341.313
SRR8749028MeJA induced 9h200.398
SRR8749029MeJA induced 9h360.724
SRR8749030Uninduced169.187
SRR8749031Uninduced199.853
SRR8749032Uninduced233.112

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root160.363
SRR8400027Control-Root151.080

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved