Gene detail information of Glyur000407s00023572.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24040.2 | 1.00E-78 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | KDO82565.1 | 5.43E-106 | hypothetical protein CISIN_1g021820mg [Citrus sinensis] |
| COG | YP_007099751.1 | 2.00E-07 | acetyltransferase [Chamaesiphon minutus PCC 6605] |
| trEMBL | tr|A0A067GV42|A0A067GV42_CITSI | 2.00E-106 | Uncharacterized protein {ECO:0000313|EMBL:KDO82565.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00407 | 117308 | 121275 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000407s00023572.1 | PF00583.19 | Acetyltransf_1 | 203 | 274 | 8.30E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.982 |
| SRR1783600 | control | 8.051 |
| SRR1783602 | moderate drought stress | 19.012 |
| SRR1811619 | moderate drought stress | 17.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.433 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.799 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.353 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.701 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.882 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.661 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.776 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.779 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.175 |
| SRR2967015 | Control (Tissue:root) | 15.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 13.802 |
| SRR9715740 | Leave | 15.059 |
| SRR9715741 | Leave | 12.617 |
| SRR9715739 | Root | 5.091 |
| SRR9715742 | Root | 7.765 |
| SRR9715743 | Root | 7.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.503 |
| SRR8749028 | MeJA induced 9h | 11.266 |
| SRR8749029 | MeJA induced 9h | 3.862 |
| SRR8749030 | Uninduced | 2.191 |
| SRR8749031 | Uninduced | 1.259 |
| SRR8749032 | Uninduced | 3.980 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.513 |
| SRR8400027 | Control-Root | 9.907 |