Gene detail information of Glyur000408s00029655.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G79530.1 | 8.00E-04 | glyceraldehyde-3-phosphate dehydrogenase of plastid 1 |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00408 | 77569 | 84799 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.789 |
| SRR1783600 | control | 0.579 |
| SRR1783602 | moderate drought stress | 1.697 |
| SRR1811619 | moderate drought stress | 1.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.828 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.637 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.384 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.195 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.133 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.200 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.205 |
| SRR9715739 | Root | 0.087 |
| SRR9715742 | Root | 0.742 |
| SRR9715743 | Root | 0.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.028 |
| SRR8749028 | MeJA induced 9h | 0.041 |
| SRR8749029 | MeJA induced 9h | 0.002 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.784 |
| SRR8400027 | Control-Root | 1.654 |