Gene detail information of Glyur000410s00016183.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45050.13.00E-46GATA transcription factor 2
NRXP_003530174.21.51E-90PREDICTED: GATA transcription factor 2-like isoform X1 [Glycine max]
Swissprottr|O49741|GATA2_ARATH2.00E-56GATA transcription factor 2
trEMBLtr|I1KJP6|I1KJP6_SOYBN2.00E-91Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G14750.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004102431625475-


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-GATA


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0008270  zinc ion binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000410s00016183.1PF00320.22GATA1431778.30E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.573
SRR1783600control0.537
SRR1783602moderate drought stress0.696
SRR1811619moderate drought stress0.728

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.466
DRR006520Root Summer glycyrrhizin high producing strain6.623
DRR006521Root Winter glycyrrhizin high producing strain0.108
DRR006522Root Winter glycyrrhizin high producing strain0.107
DRR006523Root Summer glycyrrhizin low producing strain16.868
DRR006524Root Summer glycyrrhizin low producing strain15.824
DRR006525Leaf Summer glycyrrhizin high producing strain2.409
DRR006526Leaf Summer glycyrrhizin high producing strain2.443

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.763
SRR2868004Drought Stress(Tissue:root)2.329
SRR2967015Control (Tissue:root)3.825

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.258
SRR9715740Leave1.514
SRR9715741Leave2.125
SRR9715739Root15.498
SRR9715742Root14.051
SRR9715743Root13.299

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h50.508
SRR8749028MeJA induced 9h13.164
SRR8749029MeJA induced 9h24.882
SRR8749030Uninduced9.600
SRR8749031Uninduced0.245
SRR8749032Uninduced5.119

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.019
SRR8400027Control-Root1.687

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved