Gene detail information of Glyur000413s00015473.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G30300.1 | 2.00E-139 | Metallo-hydrolase/oxidoreductase superfamily protein |
| NR | XP_004485977.1 | 0 | PREDICTED: putative hydrolase C777.06c-like [Cicer arietinum] |
| COG | NP_212667.1 | 1.00E-25 | phnP protein [Borrelia burgdorferi B31] |
| trEMBL | tr|G7IP30|G7IP30_MEDTR | 0 | Metallo-hydrolase/oxidoreductase superfamily protein {ECO:0000313|EMBL:AES64115.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00413 | 102431 | 107309 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000413s00015473.1 | PF12706.2 | Lactamase_B_2 | 131 | 348 | 3.50E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.637 |
| SRR1783600 | control | 17.094 |
| SRR1783602 | moderate drought stress | 8.835 |
| SRR1811619 | moderate drought stress | 8.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.491 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.975 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.453 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.820 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.055 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.633 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 21.774 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.271 |
| SRR2967015 | Control (Tissue:root) | 13.703 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.431 |
| SRR9715740 | Leave | 3.525 |
| SRR9715741 | Leave | 5.608 |
| SRR9715739 | Root | 2.434 |
| SRR9715742 | Root | 6.659 |
| SRR9715743 | Root | 6.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.255 |
| SRR8749028 | MeJA induced 9h | 16.035 |
| SRR8749029 | MeJA induced 9h | 14.625 |
| SRR8749030 | Uninduced | 9.717 |
| SRR8749031 | Uninduced | 10.103 |
| SRR8749032 | Uninduced | 9.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.423 |
| SRR8400027 | Control-Root | 17.939 |