Gene detail information of Glyur000415s00025770.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15220.1 | 0 | Protein kinase superfamily protein |
| NR | XP_004488744.1 | 0 | PREDICTED: mitogen-activated protein kinase kinase kinase kinase 3-like isoform X4 [Cicer arietinum] |
| COG | YP_003298703.1 | 5.00E-30 | serine/threonine protein kinase [Thermomonospora curvata DSM 43183] |
| Swissprot | tr|Q9CAD5|YODA_ARATH | 1.00E-54 | Mitogen-activated protein kinase kinase kinase YODA |
| trEMBL | tr|A0A072V9F9|A0A072V9F9_MEDTR | 0 | MAP kinase {ECO:0000313|EMBL:KEH38689.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00415 | 56358 | 64843 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.1.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000415s00025770.1 | PF00069.20 | Pkinase | 16 | 262 | 3.80E-67 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.959 |
| SRR1783600 | control | 5.812 |
| SRR1783602 | moderate drought stress | 5.263 |
| SRR1811619 | moderate drought stress | 5.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.048 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.981 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.782 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.609 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.593 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.655 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.784 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 17.618 |
| SRR2868004 | Drought Stress(Tissue:root) | 14.984 |
| SRR2967015 | Control (Tissue:root) | 15.904 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.031 |
| SRR9715740 | Leave | 4.755 |
| SRR9715741 | Leave | 5.945 |
| SRR9715739 | Root | 1.153 |
| SRR9715742 | Root | 6.282 |
| SRR9715743 | Root | 4.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.309 |
| SRR8749028 | MeJA induced 9h | 13.546 |
| SRR8749029 | MeJA induced 9h | 5.156 |
| SRR8749030 | Uninduced | 5.330 |
| SRR8749031 | Uninduced | 2.810 |
| SRR8749032 | Uninduced | 3.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.989 |
| SRR8400027 | Control-Root | 15.736 |