Gene detail information of Glyur000415s00025780.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G53890.10phytosylfokine-alpha receptor 2
NRXP_007149480.10hypothetical protein PHAVU_005G073800g [Phaseolus vulgaris]
COGYP_004775215.11.00E-36RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9FN37|PSKR2_ARATH0Phytosulfokine receptor 2 (Precursor)
trEMBLtr|V7BU37|V7BU37_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW21474.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00415123535126717-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000415s00025780.1PF08263.7LRRNT_238751.60E-05
Glyur000415s00025780.1PF00560.28LRR_12813030.43
Glyur000415s00025780.1PF00560.28LRR_13293510.27
Glyur000415s00025780.1PF13855.1LRR_84274875.80E-07
Glyur000415s00025780.1PF13855.1LRR_85876452.50E-08
Glyur000415s00025780.1PF00069.20Pkinase78010459.40E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.130
SRR1783600control13.117
SRR1783602moderate drought stress12.000
SRR1811619moderate drought stress11.936

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.916
DRR006520Root Summer glycyrrhizin high producing strain2.808
DRR006521Root Winter glycyrrhizin high producing strain5.877
DRR006522Root Winter glycyrrhizin high producing strain5.758
DRR006523Root Summer glycyrrhizin low producing strain3.191
DRR006524Root Summer glycyrrhizin low producing strain3.220
DRR006525Leaf Summer glycyrrhizin high producing strain0.931
DRR006526Leaf Summer glycyrrhizin high producing strain0.908

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.560
SRR2868004Drought Stress(Tissue:root)46.799
SRR2967015Control (Tissue:root)46.505

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.436
SRR9715740Leave2.343
SRR9715741Leave4.266
SRR9715739Root25.026
SRR9715742Root19.050
SRR9715743Root18.205

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.151
SRR8749028MeJA induced 9h45.060
SRR8749029MeJA induced 9h11.590
SRR8749030Uninduced28.847
SRR8749031Uninduced10.541
SRR8749032Uninduced7.738

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root57.613
SRR8400027Control-Root45.564

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved