Gene detail information of Glyur000417s00031395.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16520.3 | 3.00E-110 | UDP-glucosyl transferase 88A1 |
| NR | XP_003533971.1 | 0 | PREDICTED: UDP-glycosyltransferase 88A1-like [Glycine max] |
| Swissprot | tr|Q9LK73|U88A1_ARATH | 3.00E-134 | UDP-glycosyltransferase 88A1 |
| trEMBL | tr|I1L2Z1|I1L2Z1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G23750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00417 | 167430 | 169681 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000417s00031395.1 | PF00201.13 | UDPGT | 105 | 394 | 6.30E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.346 |
| SRR1783600 | control | 0.270 |
| SRR1783602 | moderate drought stress | 0.042 |
| SRR1811619 | moderate drought stress | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.040 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.080 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.209 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.082 |
| SRR2967015 | Control (Tissue:root) | 0.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.981 |
| SRR9715740 | Leave | 8.145 |
| SRR9715741 | Leave | 4.130 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.867 |
| SRR9715743 | Root | 0.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.666 |
| SRR8400027 | Control-Root | 0.615 |