Gene detail information of Glyur000418s00021340.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G02130.10receptor-like protein kinase 2
NRXP_004489461.10PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2-like isoform X1 [Cicer arietinum]
COGYP_004775215.17.00E-30RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9S7I6|RPK2_ARATH0LRR receptor-like serine/threonine-protein kinase RPK2 (Precursor)
trEMBLtr|A0A072U6P6|A0A072U6P6_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH25051.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004184622050025+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000418s00021340.1PF08263.7LRRNT_242848.10E-10
Glyur000418s00021340.1PF12799.2LRR_41682051.90E-07
Glyur000418s00021340.1PF00560.28LRR_12652870.01
Glyur000418s00021340.1PF00560.28LRR_13133350.89
Glyur000418s00021340.1PF00560.28LRR_16206410.23
Glyur000418s00021340.1PF13855.1LRR_86457031.40E-07
Glyur000418s00021340.1PF00069.20Pkinase85410522.10E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.430
SRR1783600control13.401
SRR1783602moderate drought stress13.516
SRR1811619moderate drought stress12.965

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.633
DRR006520Root Summer glycyrrhizin high producing strain21.763
DRR006521Root Winter glycyrrhizin high producing strain4.880
DRR006522Root Winter glycyrrhizin high producing strain4.635
DRR006523Root Summer glycyrrhizin low producing strain28.360
DRR006524Root Summer glycyrrhizin low producing strain28.430
DRR006525Leaf Summer glycyrrhizin high producing strain9.184
DRR006526Leaf Summer glycyrrhizin high producing strain8.989

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.143
SRR2868004Drought Stress(Tissue:root)25.145
SRR2967015Control (Tissue:root)22.814

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.468
SRR9715740Leave17.148
SRR9715741Leave24.267
SRR9715739Root38.000
SRR9715742Root32.613
SRR9715743Root31.640

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.653
SRR8749028MeJA induced 9h13.470
SRR8749029MeJA induced 9h5.687
SRR8749030Uninduced6.942
SRR8749031Uninduced7.682
SRR8749032Uninduced5.055

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.968
SRR8400027Control-Root19.163

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved