Gene detail information of Glyur000418s00021341.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G02130.10receptor-like protein kinase 2
NRXP_004489461.10PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2-like isoform X1 [Cicer arietinum]
COGYP_004775215.13.00E-31RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9S7I6|RPK2_ARATH0LRR receptor-like serine/threonine-protein kinase RPK2 (Precursor)
trEMBLtr|I1LWS6|I1LWS6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G06210.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004185315657168-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000418s00021341.1PF08263.7LRRNT_242875.40E-08
Glyur000418s00021341.1PF13855.1LRR_81722322.70E-08
Glyur000418s00021341.1PF00560.28LRR_12692910.01
Glyur000418s00021341.1PF13855.1LRR_86276861.90E-08
Glyur000418s00021341.1PF00069.20Pkinase86110594.20E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.930
SRR1783600control17.829
SRR1783602moderate drought stress20.318
SRR1811619moderate drought stress19.839

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.864
DRR006520Root Summer glycyrrhizin high producing strain25.488
DRR006521Root Winter glycyrrhizin high producing strain4.521
DRR006522Root Winter glycyrrhizin high producing strain4.166
DRR006523Root Summer glycyrrhizin low producing strain32.478
DRR006524Root Summer glycyrrhizin low producing strain31.496
DRR006525Leaf Summer glycyrrhizin high producing strain10.992
DRR006526Leaf Summer glycyrrhizin high producing strain10.732

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.057
SRR2868004Drought Stress(Tissue:root)34.510
SRR2967015Control (Tissue:root)29.426

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.901
SRR9715740Leave25.979
SRR9715741Leave34.711
SRR9715739Root45.292
SRR9715742Root34.543
SRR9715743Root37.264

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.772
SRR8749028MeJA induced 9h16.213
SRR8749029MeJA induced 9h6.075
SRR8749030Uninduced6.778
SRR8749031Uninduced6.075
SRR8749032Uninduced5.427

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.701
SRR8400027Control-Root23.417

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved