Gene detail information of Glyur000418s00021359.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27680.1 | 2.00E-05 | ADPGLC-PPase large subunit |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00418 | 156730 | 159705 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00975 | glgC | EC:2.7.7.27 | Starch and sucrose metabolism | map00500 |
| Amino sugar and nucleotide sugar metabolism | map00520 | |||
| Biofilm formation - Escherichia coli | map02026 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.259 |
| SRR1783600 | control | 0.267 |
| SRR1783602 | moderate drought stress | 0.245 |
| SRR1811619 | moderate drought stress | 0.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.821 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.586 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.087 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.143 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.090 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.618 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.159 |
| SRR2967015 | Control (Tissue:root) | 0.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.071 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.021 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.396 |
| SRR8749028 | MeJA induced 9h | 0.344 |
| SRR8749029 | MeJA induced 9h | 0.315 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.361 |
| SRR8400027 | Control-Root | 0.299 |