Gene detail information of Glyur000419s00025982.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G21780.21.00E-113BTB/POZ domain-containing protein
NRXP_003602063.10TD and POZ domain-containing protein [Medicago truncatula]
Swissprottr|Q9XHZ8|Y1178_ARATH3.00E-149BTB/POZ domain-containing protein At1g21780
trEMBLtr|G7J501|G7J501_MEDTR0BTB/POZ domain plant protein {ECO:0000313|EMBL:AES72314.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004195976863547-


Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF
Ubiquitin FamilyBTB
Ubiquitin Family3-box


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000419s00025982.1PF00651.26BTB1432466.20E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.677
SRR1783600control6.379
SRR1783602moderate drought stress8.340
SRR1811619moderate drought stress8.310

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.094
DRR006520Root Summer glycyrrhizin high producing strain11.765
DRR006521Root Winter glycyrrhizin high producing strain16.515
DRR006522Root Winter glycyrrhizin high producing strain15.971
DRR006523Root Summer glycyrrhizin low producing strain14.818
DRR006524Root Summer glycyrrhizin low producing strain14.596
DRR006525Leaf Summer glycyrrhizin high producing strain16.798
DRR006526Leaf Summer glycyrrhizin high producing strain16.150

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.964
SRR2868004Drought Stress(Tissue:root)23.384
SRR2967015Control (Tissue:root)28.276

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.036
SRR9715740Leave21.008
SRR9715741Leave20.816
SRR9715739Root7.626
SRR9715742Root7.069
SRR9715743Root6.752

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.426
SRR8749028MeJA induced 9h35.495
SRR8749029MeJA induced 9h37.123
SRR8749030Uninduced39.553
SRR8749031Uninduced48.199
SRR8749032Uninduced29.272

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.871
SRR8400027Control-Root12.381

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved