Gene detail information of Glyur000419s00025984.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47570.10Leucine-rich repeat protein kinase family protein
NRXP_004512338.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum]
COGYP_004775215.16.00E-48RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGP4|Y3475_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (Precursor)
trEMBLtr|G7KAT7|G7KAT7_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES94850.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004199073697069-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000419s00025984.1PF08263.7LRRNT_237762.40E-11
Glyur000419s00025984.1PF00560.28LRR_14264461.2
Glyur000419s00025984.1PF00560.28LRR_14724930.31
Glyur000419s00025984.1PF13855.1LRR_85456042.70E-10
Glyur000419s00025984.1PF07714.12Pkinase_Tyr7139281.50E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.074
SRR1783600control1.038
SRR1783602moderate drought stress1.112
SRR1811619moderate drought stress1.230

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.541
DRR006520Root Summer glycyrrhizin high producing strain1.521
DRR006521Root Winter glycyrrhizin high producing strain1.265
DRR006522Root Winter glycyrrhizin high producing strain1.560
DRR006523Root Summer glycyrrhizin low producing strain1.114
DRR006524Root Summer glycyrrhizin low producing strain1.111
DRR006525Leaf Summer glycyrrhizin high producing strain2.615
DRR006526Leaf Summer glycyrrhizin high producing strain2.480

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.046
SRR2868004Drought Stress(Tissue:root)0.992
SRR2967015Control (Tissue:root)1.232

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.330
SRR9715740Leave3.038
SRR9715741Leave5.610
SRR9715739Root0.189
SRR9715742Root0.281
SRR9715743Root0.270

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.972
SRR8749028MeJA induced 9h0.791
SRR8749029MeJA induced 9h0.728
SRR8749030Uninduced0.702
SRR8749031Uninduced0.546
SRR8749032Uninduced0.346

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.766
SRR8400027Control-Root1.505

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved