Gene detail information of Glyur000420s00021417.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G29420.12.00E-54glutathione S-transferase tau 7
NRXP_010264127.12.63E-150PREDICTED: uncharacterized protein LOC104602212 [Nelumbo nucifera]
COGYP_007096787.14.00E-17glutathione S-transferase [Chamaesiphon minutus PCC 6605]
Swissprottr|P32110|GSTX6_SOYBN2.00E-73Probable glutathione S-transferase
trEMBLtr|V7CMV3|V7CMV3_PHAVU6.00E-130Uncharacterized protein {ECO:0000313|EMBL:ESW31479.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004201257617277-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00799GST, gst EC:2.5.1.18 Glutathione metabolism map00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204
Fluid shear stress and atherosclerosismap05418
Platinum drug resistancemap01524


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000420s00021417.1PF13417.1GST_N_38789.60E-15
Glyur000420s00021417.1PF00043.20GST_C1171954.80E-07
Glyur000420s00021417.1PF13417.1GST_N_32363062.90E-16
Glyur000420s00021417.1PF00043.20GST_C3394236.80E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.677
SRR1783600control18.201
SRR1783602moderate drought stress23.923
SRR1811619moderate drought stress23.581

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.742
DRR006520Root Summer glycyrrhizin high producing strain20.173
DRR006521Root Winter glycyrrhizin high producing strain89.083
DRR006522Root Winter glycyrrhizin high producing strain86.583
DRR006523Root Summer glycyrrhizin low producing strain102.209
DRR006524Root Summer glycyrrhizin low producing strain102.276
DRR006525Leaf Summer glycyrrhizin high producing strain78.750
DRR006526Leaf Summer glycyrrhizin high producing strain79.122

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.684
SRR2868004Drought Stress(Tissue:root)89.326
SRR2967015Control (Tissue:root)69.078

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave191.058
SRR9715740Leave324.252
SRR9715741Leave353.631
SRR9715739Root55.393
SRR9715742Root39.182
SRR9715743Root41.866

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h265.045
SRR8749028MeJA induced 9h270.030
SRR8749029MeJA induced 9h299.068
SRR8749030Uninduced827.971
SRR8749031Uninduced638.228
SRR8749032Uninduced640.022

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root46.422
SRR8400027Control-Root27.811

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved