Gene detail information of Glyur000422s00020633.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77810.2 | 7.00E-152 | Galactosyltransferase family protein |
| NR | XP_004515661.1 | 0 | PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q6NQB7|B3GT7_ARATH | 0 | Beta-1,3-galactosyltransferase 7 |
| trEMBL | tr|G7J458|G7J458_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK45036.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00422 | 996 | 6064 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000422s00020633.1 | PF13334.1 | DUF4094 | 18 | 97 | 3.90E-24 |
| Glyur000422s00020633.1 | PF01762.16 | Galactosyl_T | 141 | 317 | 9.90E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.492 |
| SRR1783600 | control | 13.686 |
| SRR1783602 | moderate drought stress | 11.698 |
| SRR1811619 | moderate drought stress | 11.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.886 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.315 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.950 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.767 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.620 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 40.518 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.982 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.812 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 46.242 |
| SRR2868004 | Drought Stress(Tissue:root) | 52.633 |
| SRR2967015 | Control (Tissue:root) | 48.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 27.826 |
| SRR9715740 | Leave | 18.379 |
| SRR9715741 | Leave | 37.731 |
| SRR9715739 | Root | 12.125 |
| SRR9715742 | Root | 23.646 |
| SRR9715743 | Root | 21.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 73.245 |
| SRR8749028 | MeJA induced 9h | 83.752 |
| SRR8749029 | MeJA induced 9h | 41.017 |
| SRR8749030 | Uninduced | 61.626 |
| SRR8749031 | Uninduced | 31.407 |
| SRR8749032 | Uninduced | 18.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 35.618 |
| SRR8400027 | Control-Root | 32.803 |