Gene detail information of Glyur000422s00020641.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G08500.11.00E-120MAPK/ERK kinase kinase 1
NRXP_003523467.10PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Glycine max]
COGYP_643511.12.00E-25serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q39008|M3K1_ARATH3.00E-173Mitogen-activated protein kinase kinase kinase 1
trEMBLtr|I1JZA5|I1JZA5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G43270.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004228945096249+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13414MEKK1 EC:2.7.11.25 MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000422s00020641.1PF00069.20Pkinase2995528.40E-67


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.195
SRR1783600control12.078
SRR1783602moderate drought stress12.680
SRR1811619moderate drought stress12.631

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.564
DRR006520Root Summer glycyrrhizin high producing strain17.602
DRR006521Root Winter glycyrrhizin high producing strain19.603
DRR006522Root Winter glycyrrhizin high producing strain18.894
DRR006523Root Summer glycyrrhizin low producing strain27.759
DRR006524Root Summer glycyrrhizin low producing strain27.603
DRR006525Leaf Summer glycyrrhizin high producing strain7.860
DRR006526Leaf Summer glycyrrhizin high producing strain7.909

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.584
SRR2868004Drought Stress(Tissue:root)36.169
SRR2967015Control (Tissue:root)30.817

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave40.885
SRR9715740Leave30.600
SRR9715741Leave54.205
SRR9715739Root17.538
SRR9715742Root34.968
SRR9715743Root31.548

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.186
SRR8749028MeJA induced 9h30.454
SRR8749029MeJA induced 9h14.769
SRR8749030Uninduced36.523
SRR8749031Uninduced26.127
SRR8749032Uninduced16.964

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.034
SRR8400027Control-Root28.331

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved