Gene detail information of Glyur000423s00024445.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G71695.14.00E-54Peroxidase superfamily protein
NRKHN46463.13.32E-93S-norcoclaurine synthase [Glycine soja]
Swissprottr|Q96520|PER12_ARATH7.00E-64Peroxidase 12 (Precursor)
trEMBLtr|I1LP68|I1LP68_SOYBN1.00E-93Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G01970.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00423129364133514-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006952  defense response

GO:0006979  response to oxidative stress

GO:0009607  response to biotic stimulus

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000423s00024445.1PF00407.14Bet_v_131452.20E-15
Glyur000423s00024445.1PF00141.18peroxidase1803062.00E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.712
SRR1783600control19.673
SRR1783602moderate drought stress22.082
SRR1811619moderate drought stress22.372

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.378
DRR006520Root Summer glycyrrhizin high producing strain22.739
DRR006521Root Winter glycyrrhizin high producing strain14.158
DRR006522Root Winter glycyrrhizin high producing strain13.459
DRR006523Root Summer glycyrrhizin low producing strain26.269
DRR006524Root Summer glycyrrhizin low producing strain26.606
DRR006525Leaf Summer glycyrrhizin high producing strain13.313
DRR006526Leaf Summer glycyrrhizin high producing strain12.467

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)58.846
SRR2868004Drought Stress(Tissue:root)60.421
SRR2967015Control (Tissue:root)44.153

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.246
SRR9715740Leave4.953
SRR9715741Leave6.465
SRR9715739Root4.354
SRR9715742Root36.788
SRR9715743Root30.719

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.343
SRR8749028MeJA induced 9h0.186
SRR8749029MeJA induced 9h0.269
SRR8749030Uninduced0.056
SRR8749031Uninduced0.068
SRR8749032Uninduced0.133

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.476
SRR8400027Control-Root14.991

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved