Gene detail information of Glyur000423s00024447.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45550.11.00E-68cytochrome P450, family 76, subfamily C, polypeptide 4
NRXP_004505593.17.57E-114PREDICTED: geraniol 8-hydroxylase-like [Cicer arietinum]
COGYP_003265754.11.00E-29cytochrome P450 [Haliangium ochraceum DSM 14365]
Swissprottr|Q8VWZ7|C76B6_CATRO2.00E-82Geraniol 8-hydroxylase
trEMBLtr|G7JST5|G7JST5_MEDTR2.00E-111Cytochrome P450 family protein {ECO:0000313|EMBL:AES89642.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00423157901160575+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP76C4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000423s00024447.1PF00067.17p450191986.40E-65


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.275
SRR1783600control3.862
SRR1783602moderate drought stress1.386
SRR1811619moderate drought stress1.221

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.255
DRR006520Root Summer glycyrrhizin high producing strain2.222
DRR006521Root Winter glycyrrhizin high producing strain1.076
DRR006522Root Winter glycyrrhizin high producing strain0.524
DRR006523Root Summer glycyrrhizin low producing strain2.482
DRR006524Root Summer glycyrrhizin low producing strain1.910
DRR006525Leaf Summer glycyrrhizin high producing strain0.298
DRR006526Leaf Summer glycyrrhizin high producing strain0.297

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.191
SRR2868004Drought Stress(Tissue:root)17.848
SRR2967015Control (Tissue:root)10.929

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.328
SRR9715740Leave1.862
SRR9715741Leave3.112
SRR9715739Root1.679
SRR9715742Root3.915
SRR9715743Root4.348

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.008
SRR8749028MeJA induced 9h22.271
SRR8749029MeJA induced 9h45.358
SRR8749030Uninduced69.824
SRR8749031Uninduced35.080
SRR8749032Uninduced61.110

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.432
SRR8400027Control-Root2.335

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved