Gene detail information of Glyur000424s00026900.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G02130.13.00E-178receptor-like protein kinase 2
NRXP_004493090.10PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2-like [Cicer arietinum]
COGYP_004775215.16.00E-33RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9S7I6|RPK2_ARATH0LRR receptor-like serine/threonine-protein kinase RPK2 (Precursor)
trEMBLtr|V7CXH3|V7CXH3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW33596.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004246183365000+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000424s00026900.1PF08263.7LRRNT_229693.30E-09
Glyur000424s00026900.1PF13855.1LRR_82433016.50E-07
Glyur000424s00026900.1PF13855.1LRR_84845422.40E-07
Glyur000424s00026900.1PF00560.28LRR_15555770.13
Glyur000424s00026900.1PF00069.20Pkinase7109083.80E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.723
SRR1783600control5.635
SRR1783602moderate drought stress3.790
SRR1811619moderate drought stress3.635

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.759
DRR006520Root Summer glycyrrhizin high producing strain5.847
DRR006521Root Winter glycyrrhizin high producing strain4.150
DRR006522Root Winter glycyrrhizin high producing strain3.986
DRR006523Root Summer glycyrrhizin low producing strain4.557
DRR006524Root Summer glycyrrhizin low producing strain4.548
DRR006525Leaf Summer glycyrrhizin high producing strain1.642
DRR006526Leaf Summer glycyrrhizin high producing strain1.772

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.574
SRR2868004Drought Stress(Tissue:root)6.846
SRR2967015Control (Tissue:root)5.692

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.799
SRR9715740Leave1.992
SRR9715741Leave1.095
SRR9715739Root1.279
SRR9715742Root2.434
SRR9715743Root2.013

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.542
SRR8749028MeJA induced 9h3.125
SRR8749029MeJA induced 9h1.241
SRR8749030Uninduced0.127
SRR8749031Uninduced0.078
SRR8749032Uninduced0.124

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.546
SRR8400027Control-Root7.614

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved