Gene detail information of Glyur000424s00026904.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13430.11.00E-108Ubiquinol-cytochrome C reductase iron-sulfur subunit
NRXP_007161611.14.82E-177hypothetical protein PHAVU_001G083900g [Phaseolus vulgaris]
COGYP_006373746.11.00E-60ubiquinol-cytochrome c reductase, iron-sulfur subunit [Tistrella mobilis KA081020-065]
Swissprottr|P51132|UCRI2_TOBAC5.00E-145Cytochrome b-c1 complex subunit Rieske-2, mitochondrial (Precursor)
trEMBLtr|V7CWE7|V7CWE7_PHAVU2.00E-177Cytochrome b-c1 complex subunit Rieske, mitochondrial {ECO:0000256|RuleBase:RU004494}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00424111679115611-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00411UQCRFS1, RIP1, petA EC:1.10.2.2 Oxidative phosphorylation map00190
Two-component systemmap02020
Cardiac muscle contractionmap04260
Alzheimer's diseasemap05010
Parkinson's diseasemap05012
Huntington's diseasemap05016
Non-alcoholic fatty liver disease (NAFLD)map04932


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


cellular_component

GO:0016020  membrane


molecular_function

GO:0008121  ubiquinol-cytochrome-c reductase activity

GO:0016491  oxidoreductase activity

GO:0016679  oxidoreductase activity, acting on diphenols and related substances as donors

GO:0051537  2 iron, 2 sulfur cluster binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000424s00026904.1PF02921.9UCR_TM1271771.10E-12
Glyur000424s00026904.1PF00355.21Rieske2122951.90E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control105.286
SRR1783600control104.551
SRR1783602moderate drought stress88.380
SRR1811619moderate drought stress86.577

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain112.384
DRR006520Root Summer glycyrrhizin high producing strain111.451
DRR006521Root Winter glycyrrhizin high producing strain77.534
DRR006522Root Winter glycyrrhizin high producing strain75.398
DRR006523Root Summer glycyrrhizin low producing strain93.428
DRR006524Root Summer glycyrrhizin low producing strain89.538
DRR006525Leaf Summer glycyrrhizin high producing strain98.801
DRR006526Leaf Summer glycyrrhizin high producing strain98.542

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)149.494
SRR2868004Drought Stress(Tissue:root)122.203
SRR2967015Control (Tissue:root)85.777

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave96.624
SRR9715740Leave115.169
SRR9715741Leave96.991
SRR9715739Root72.588
SRR9715742Root72.104
SRR9715743Root75.610

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h134.872
SRR8749028MeJA induced 9h81.143
SRR8749029MeJA induced 9h112.429
SRR8749030Uninduced95.814
SRR8749031Uninduced110.867
SRR8749032Uninduced100.498

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root107.767
SRR8400027Control-Root99.652

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved