Gene detail information of Glyur000425s00021400.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37990.1 | 3.00E-101 | elicitor-activated gene 3-2 |
| NR | XP_004512560.1 | 0 | PREDICTED: probable mannitol dehydrogenase-like [Cicer arietinum] |
| COG | YP_003817759.1 | 9.00E-104 | alcohol dehydrogenase GroES [Brevundimonas subvibrioides ATCC 15264] |
| Swissprot | tr|Q9ZRF1|MTDH_FRAAN | 2.00E-172 | Probable mannitol dehydrogenase |
| trEMBL | tr|I3T3L8|I3T3L8_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK47110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00425 | 80470 | 83019 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00083 | E1.1.1.195 | EC:1.1.1.195 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000425s00021400.1 | PF08240.7 | ADH_N | 39 | 152 | 5.50E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.047 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.068 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.258 |
| SRR8749028 | MeJA induced 9h | 0.209 |
| SRR8749029 | MeJA induced 9h | 0.047 |
| SRR8749030 | Uninduced | 0.256 |
| SRR8749031 | Uninduced | 0.119 |
| SRR8749032 | Uninduced | 0.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.046 |
| SRR8400027 | Control-Root | 0.000 |