Gene detail information of Glyur000425s00021404.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G37990.11.00E-88elicitor-activated gene 3-2
NRKHN38894.16.26E-170Putative mannitol dehydrogenase [Glycine soja]
COGYP_005369449.18.00E-101alcohol dehydrogenase [Corallococcus coralloides DSM 2259]
Swissprottr|Q9ZRF1|MTDH_FRAAN5.00E-141Probable mannitol dehydrogenase
trEMBLtr|I1L4T5|I1L4T5_SOYBN1.00E-169Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G33390.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0042598571118339+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00083E1.1.1.195 EC:1.1.1.195 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000425s00021404.1PF00107.21ADH_zinc_N11207.50E-18
Glyur000425s00021404.1PF08240.7ADH_N2272610.00011
Glyur000425s00021404.1PF08240.7ADH_N2653775.60E-25
Glyur000425s00021404.1PF00107.21ADH_zinc_N4215352.80E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.710
SRR1783600control0.599
SRR1783602moderate drought stress0.659
SRR1811619moderate drought stress0.588

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.167
DRR006520Root Summer glycyrrhizin high producing strain0.182
DRR006521Root Winter glycyrrhizin high producing strain0.052
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain2.950
DRR006524Root Summer glycyrrhizin low producing strain3.027
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)67.569
SRR2868004Drought Stress(Tissue:root)123.712
SRR2967015Control (Tissue:root)45.183

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.154
SRR9715740Leave0.026
SRR9715741Leave0.051
SRR9715739Root2.701
SRR9715742Root9.043
SRR9715743Root7.157

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.124
SRR8749028MeJA induced 9h47.113
SRR8749029MeJA induced 9h31.104
SRR8749030Uninduced137.851
SRR8749031Uninduced95.241
SRR8749032Uninduced55.045

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.330
SRR8400027Control-Root9.110

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved