Gene detail information of Glyur000426s00022725.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G14420.34.00E-87Aldolase-type TIM barrel family protein
NRNP_001241302.11.52E-116peroxisomal (S)-2-hydroxy-acid oxidase GLO1-like [Glycine max]
COGYP_003890366.18.00E-58FMN-dependent alpha-hydroxy acid dehydrogenase [Cyanothece sp. PCC 7822]
Swissprottr|O49506|GLO5_ARATH1.00E-110Peroxisomal (S)-2-hydroxy-acid oxidase GLO5
trEMBLtr|I1KU94|I1KU94_SOYBN1.00E-118Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G18750.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00426101373106998-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K11517HAO EC:1.1.3.15 Carbon metabolism map01200
Glyoxylate and dicarboxylate metabolismmap00630
Peroxisomemap04146


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0010181  FMN binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000426s00022725.2PF01070.13FMN_dh131733.10E-63
Glyur000426s00022725.2PF00478.20IMPDH1972419.30E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.000
SRR1783602moderate drought stress0.086
SRR1811619moderate drought stress0.086

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.359
DRR006520Root Summer glycyrrhizin high producing strain0.262
DRR006521Root Winter glycyrrhizin high producing strain0.239
DRR006522Root Winter glycyrrhizin high producing strain0.186
DRR006523Root Summer glycyrrhizin low producing strain1.409
DRR006524Root Summer glycyrrhizin low producing strain1.124
DRR006525Leaf Summer glycyrrhizin high producing strain1151.172
DRR006526Leaf Summer glycyrrhizin high producing strain1150.222

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.233
SRR2868004Drought Stress(Tissue:root)9.794
SRR2967015Control (Tissue:root)0.943

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1637.648
SRR9715740Leave1995.874
SRR9715741Leave1516.968
SRR9715739Root0.508
SRR9715742Root1.726
SRR9715743Root1.690

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.056
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.044
SRR8749031Uninduced0.087
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.118
SRR8400027Control-Root0.108

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved