Gene detail information of Glyur000426s00022739.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17180.1 | 1.00E-30 | glutathione S-transferase TAU 25 |
| NR | ACU13552.1 | 1.27E-45 | unknown [Glycine max] |
| COG | YP_550966.1 | 2.00E-08 | glutathione S-transferase-like protein [Polaromonas sp. JS666] |
| Swissprot | tr|Q9SHH7|GSTUP_ARATH | 2.00E-37 | Glutathione S-transferase U25 |
| trEMBL | tr|C6SWC9|C6SWC9_SOYBN | 5.00E-46 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU13552.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00426 | 146121 | 146384 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000426s00022739.1 | PF00043.20 | GST_C | 3 | 59 | 5.90E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.614 |
| SRR1783600 | control | 11.047 |
| SRR1783602 | moderate drought stress | 3.229 |
| SRR1811619 | moderate drought stress | 3.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.352 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 166.869 |
| SRR2868004 | Drought Stress(Tissue:root) | 81.886 |
| SRR2967015 | Control (Tissue:root) | 71.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.382 |
| SRR9715740 | Leave | 0.323 |
| SRR9715741 | Leave | 0.101 |
| SRR9715739 | Root | 4.417 |
| SRR9715742 | Root | 2.700 |
| SRR9715743 | Root | 5.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.918 |
| SRR8749028 | MeJA induced 9h | 27.862 |
| SRR8749029 | MeJA induced 9h | 47.893 |
| SRR8749030 | Uninduced | 33.825 |
| SRR8749031 | Uninduced | 17.545 |
| SRR8749032 | Uninduced | 28.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 19.162 |
| SRR8400027 | Control-Root | 21.237 |