Gene detail information of Glyur000426s00022742.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78380.13.00E-67glutathione S-transferase TAU 19
NRXP_004488707.11.80E-106PREDICTED: probable glutathione S-transferase-like [Cicer arietinum]
COGYP_550966.12.00E-17glutathione S-transferase-like protein [Polaromonas sp. JS666]
Swissprottr|Q03666|GSTX4_TOBAC6.00E-89Probable glutathione S-transferase
trEMBLtr|V7BW16|V7BW16_PHAVU5.00E-100Uncharacterized protein {ECO:0000313|EMBL:ESW21240.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00426156293158772+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00799GST, gst EC:2.5.1.18 Glutathione metabolism map00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204
Fluid shear stress and atherosclerosismap05418
Platinum drug resistancemap01524


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000426s00022742.1PF13417.1GST_N_37776.30E-17
Glyur000426s00022742.1PF00043.20GST_C861635.70E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.458
SRR1783600control10.205
SRR1783602moderate drought stress13.845
SRR1811619moderate drought stress15.090

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.722
DRR006520Root Summer glycyrrhizin high producing strain10.496
DRR006521Root Winter glycyrrhizin high producing strain59.861
DRR006522Root Winter glycyrrhizin high producing strain57.506
DRR006523Root Summer glycyrrhizin low producing strain11.824
DRR006524Root Summer glycyrrhizin low producing strain11.062
DRR006525Leaf Summer glycyrrhizin high producing strain60.261
DRR006526Leaf Summer glycyrrhizin high producing strain62.775

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.073
SRR2868004Drought Stress(Tissue:root)16.558
SRR2967015Control (Tissue:root)25.569

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.858
SRR9715740Leave42.713
SRR9715741Leave44.567
SRR9715739Root10.286
SRR9715742Root14.059
SRR9715743Root13.387

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.402
SRR8749028MeJA induced 9h19.169
SRR8749029MeJA induced 9h22.332
SRR8749030Uninduced50.223
SRR8749031Uninduced30.127
SRR8749032Uninduced26.118

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.624
SRR8400027Control-Root4.600

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved