Gene detail information of Glyur000426s00022743.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78380.12.00E-60glutathione S-transferase TAU 19
NRXP_007149237.12.50E-115hypothetical protein PHAVU_005G053200g [Phaseolus vulgaris]
COGYP_007090262.11.00E-23glutathione S-transferase [Chroococcidiopsis thermalis PCC 7203]
Swissprottr|Q03666|GSTX4_TOBAC2.00E-92Probable glutathione S-transferase
trEMBLtr|V7BXE0|V7BXE0_PHAVU9.00E-116Uncharacterized protein {ECO:0000313|EMBL:ESW21231.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00426157016159493-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00799GST, gst EC:2.5.1.18 Glutathione metabolism map00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204
Fluid shear stress and atherosclerosismap05418
Platinum drug resistancemap01524


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000426s00022743.1PF13417.1GST_N_38801.70E-18
Glyur000426s00022743.1PF00043.20GST_C1201994.90E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.547
SRR1783600control15.693
SRR1783602moderate drought stress24.133
SRR1811619moderate drought stress24.320

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.485
DRR006520Root Summer glycyrrhizin high producing strain18.205
DRR006521Root Winter glycyrrhizin high producing strain94.470
DRR006522Root Winter glycyrrhizin high producing strain90.292
DRR006523Root Summer glycyrrhizin low producing strain14.883
DRR006524Root Summer glycyrrhizin low producing strain14.238
DRR006525Leaf Summer glycyrrhizin high producing strain125.523
DRR006526Leaf Summer glycyrrhizin high producing strain125.365

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.262
SRR2868004Drought Stress(Tissue:root)14.320
SRR2967015Control (Tissue:root)31.183

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.339
SRR9715740Leave34.038
SRR9715741Leave29.284
SRR9715739Root7.255
SRR9715742Root15.327
SRR9715743Root15.925

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.334
SRR8749028MeJA induced 9h3.556
SRR8749029MeJA induced 9h5.601
SRR8749030Uninduced5.564
SRR8749031Uninduced2.048
SRR8749032Uninduced4.632

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.042
SRR8400027Control-Root4.152

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved