Gene detail information of Glyur000426s00022744.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17180.1 | 2.00E-26 | glutathione S-transferase TAU 25 |
| NR | XP_007149244.1 | 2.22E-50 | hypothetical protein PHAVU_005G053900g [Phaseolus vulgaris] |
| COG | YP_007513276.1 | 1.00E-09 | putative glutathione S-transferase [Bradyrhizobium oligotrophicum S58] |
| Swissprot | tr|P46417|GSTX3_SOYBN | 1.00E-42 | Glutathione S-transferase 3 |
| trEMBL | tr|V7BW21|V7BW21_PHAVU | 8.00E-51 | Uncharacterized protein {ECO:0000313|EMBL:ESW21238.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00426 | 167921 | 168199 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000426s00022744.1 | PF13410.1 | GST_C_2 | 3 | 61 | 5.20E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.394 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.116 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.167 |
| SRR2967015 | Control (Tissue:root) | 0.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.433 |
| SRR9715740 | Leave | 0.009 |
| SRR9715741 | Leave | 0.772 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.048 |
| SRR8749028 | MeJA induced 9h | 0.381 |
| SRR8749029 | MeJA induced 9h | 0.381 |
| SRR8749030 | Uninduced | 0.694 |
| SRR8749031 | Uninduced | 0.819 |
| SRR8749032 | Uninduced | 0.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.189 |
| SRR8400027 | Control-Root | 0.092 |