Gene detail information of Glyur000428s00019745.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41020.1 | 2.00E-94 | myb family transcription factor |
| NR | XP_003541381.2 | 0 | PREDICTED: transcriptional regulator ATRX homolog isoform X1 [Glycine max] |
| trEMBL | tr|I1LYQ8|I1LYQ8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G19060.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00428 | 72448 | 74296 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000428s00019745.1 | PF13921.1 | Myb_DNA-bind_6 | 382 | 440 | 4.50E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.305 |
| SRR1783600 | control | 0.337 |
| SRR1783602 | moderate drought stress | 0.504 |
| SRR1811619 | moderate drought stress | 0.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.898 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.886 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.252 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.260 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.470 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.417 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.176 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.731 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.561 |
| SRR2967015 | Control (Tissue:root) | 0.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.026 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.027 |
| SRR9715743 | Root | 0.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.125 |
| SRR8749028 | MeJA induced 9h | 2.830 |
| SRR8749029 | MeJA induced 9h | 2.743 |
| SRR8749030 | Uninduced | 4.252 |
| SRR8749031 | Uninduced | 6.045 |
| SRR8749032 | Uninduced | 3.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.328 |
| SRR8400027 | Control-Root | 0.255 |