Gene detail information of Glyur000428s00019760.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G23870.10trehalose-phosphatase/synthase 9
NRXP_003527027.10PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9-like isoform X1 [Glycine max]
COGYP_006545085.12.00E-126alpha,alpha-trehalose-phosphate synthase (UDP-forming) [Methanoculleus bourgensis MS2]
Swissprottr|Q9LRA7|TPS9_ARATH0Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
trEMBLtr|I1KCI1|I1KCI1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G19590.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00428152361158852-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000428s00019760.2PF00982.16Glyco_transf_20605443.90E-175
Glyur000428s00019760.2PF02358.11Trehalose_PPase5958134.90E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.725
SRR1783602moderate drought stress0.136
SRR1811619moderate drought stress2.735

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.242
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.242
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain2.441
DRR006524Root Summer glycyrrhizin low producing strain2.412
DRR006525Leaf Summer glycyrrhizin high producing strain0.353
DRR006526Leaf Summer glycyrrhizin high producing strain0.373

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.066
SRR2868004Drought Stress(Tissue:root)0.529
SRR2967015Control (Tissue:root)0.000

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.968
SRR9715740Leave13.752
SRR9715741Leave0.277
SRR9715739Root33.428
SRR9715742Root0.464
SRR9715743Root2.257

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.531
SRR8749028MeJA induced 9h2.550
SRR8749029MeJA induced 9h2.446
SRR8749030Uninduced1.235
SRR8749031Uninduced1.214
SRR8749032Uninduced0.651

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.183
SRR8400027Control-Root1.221

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved