Gene detail information of Glyur000429s00022708.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G13560.10NAD-dependent malic enzyme 1
NRXP_003626824.10Pentatricopeptide repeat-containing protein [Medicago truncatula]
COGYP_005607828.14.00E-140malic enzyme [Bradyrhizobium japonicum USDA 6]
Swissprottr|P37221|MAOM_SOLTU0NAD-dependent malic enzyme 62 kDa isoform, mitochondrial (Precursor)
trEMBLtr|G7LDG5|G7LDG5_MEDTR0NADP-dependent malic enzyme {ECO:0000313|EMBL:AET01301.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004295986673698-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00028E1.1.1.39 EC:1.1.1.39 Carbon metabolism map01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0006108  malate metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004470  malic enzyme activity

GO:0004471  malate dehydrogenase (decarboxylating) (NAD+) activity

GO:0051287  NAD binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000429s00022708.1PF00390.14malic862661.20E-76
Glyur000429s00022708.1PF03949.10Malic_M2765441.60E-84


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.644
SRR1783600control24.728
SRR1783602moderate drought stress24.708
SRR1811619moderate drought stress24.455

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.413
DRR006520Root Summer glycyrrhizin high producing strain20.900
DRR006521Root Winter glycyrrhizin high producing strain13.574
DRR006522Root Winter glycyrrhizin high producing strain13.281
DRR006523Root Summer glycyrrhizin low producing strain22.958
DRR006524Root Summer glycyrrhizin low producing strain22.261
DRR006525Leaf Summer glycyrrhizin high producing strain31.930
DRR006526Leaf Summer glycyrrhizin high producing strain30.907

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.975
SRR2868004Drought Stress(Tissue:root)31.985
SRR2967015Control (Tissue:root)30.032

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave42.869
SRR9715740Leave33.953
SRR9715741Leave46.472
SRR9715739Root13.251
SRR9715742Root28.224
SRR9715743Root22.437

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.745
SRR8749028MeJA induced 9h20.098
SRR8749029MeJA induced 9h22.207
SRR8749030Uninduced9.660
SRR8749031Uninduced8.677
SRR8749032Uninduced7.592

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.610
SRR8400027Control-Root36.468

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved