Gene detail information of Glyur000429s00022711.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G26667.33.00E-87P-loop containing nucleoside triphosphate hydrolases superfamily protein
NRXP_004510144.16.07E-139PREDICTED: UMP/CMP kinase-like isoform X2 [Cicer arietinum]
COGNP_868424.13.00E-37uridylate kinase [Rhodopirellula baltica SH 1]
Swissprottr|O04905|KCY3_ARATH8.00E-120UMP-CMP kinase 3 {ECO:0000255|HAMAP-Rule:MF_03172}
trEMBLtr|K7L123|K7L123_SOYBN5.00E-139UMP-CMP kinase {ECO:0000256|HAMAP-Rule:MF_03172}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004298826199724-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13800CMPK1, UMPK EC:2.7.4.- 2.7.4.14 Pyrimidine metabolism map00240


Gene Ontology

biological_process

GO:0006139  nucleobase-containing compound metabolic process

GO:0006207  'de novo' pyrimidine nucleobase biosynthetic process

GO:0006221  pyrimidine nucleotide biosynthetic process


molecular_function

GO:0004127  cytidylate kinase activity

GO:0005524  ATP binding

GO:0009041  uridylate kinase activity

GO:0019205  nucleobase-containing compound kinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000429s00022711.2PF00406.17ADK261782.30E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control47.738
SRR1783600control47.766
SRR1783602moderate drought stress28.573
SRR1811619moderate drought stress28.738

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain63.536
DRR006520Root Summer glycyrrhizin high producing strain62.975
DRR006521Root Winter glycyrrhizin high producing strain45.881
DRR006522Root Winter glycyrrhizin high producing strain45.116
DRR006523Root Summer glycyrrhizin low producing strain48.034
DRR006524Root Summer glycyrrhizin low producing strain47.400
DRR006525Leaf Summer glycyrrhizin high producing strain56.143
DRR006526Leaf Summer glycyrrhizin high producing strain55.844

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)148.413
SRR2868004Drought Stress(Tissue:root)95.937
SRR2967015Control (Tissue:root)82.392

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave100.028
SRR9715740Leave69.267
SRR9715741Leave86.417
SRR9715739Root16.371
SRR9715742Root42.540
SRR9715743Root34.908

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h74.019
SRR8749028MeJA induced 9h81.041
SRR8749029MeJA induced 9h68.033
SRR8749030Uninduced58.914
SRR8749031Uninduced60.814
SRR8749032Uninduced40.836

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root101.966
SRR8400027Control-Root108.773

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved