Gene detail information of Glyur000431s00018632.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05170.20Galactosyltransferase family protein
NRXP_003540300.10PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoformX1 [Glycine max]
Swissprottr|A8MRC7|B3GT2_ARATH0Probable beta-1,3-galactosyltransferase 2
trEMBLtr|I1LU50|I1LU50_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G31980.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004312535430736+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT31


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006486  protein glycosylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0008378  galactosyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000431s00018632.2PF01762.16Galactosyl_T261882.60E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.537
SRR1783600control14.351
SRR1783602moderate drought stress17.513
SRR1811619moderate drought stress17.448

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.782
DRR006520Root Summer glycyrrhizin high producing strain16.538
DRR006521Root Winter glycyrrhizin high producing strain177.607
DRR006522Root Winter glycyrrhizin high producing strain172.621
DRR006523Root Summer glycyrrhizin low producing strain26.325
DRR006524Root Summer glycyrrhizin low producing strain26.087
DRR006525Leaf Summer glycyrrhizin high producing strain14.727
DRR006526Leaf Summer glycyrrhizin high producing strain14.620

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.749
SRR2868004Drought Stress(Tissue:root)38.087
SRR2967015Control (Tissue:root)40.084

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.691
SRR9715740Leave33.851
SRR9715741Leave20.293
SRR9715739Root5.771
SRR9715742Root13.839
SRR9715743Root12.875

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.807
SRR8749028MeJA induced 9h46.381
SRR8749029MeJA induced 9h22.822
SRR8749030Uninduced139.830
SRR8749031Uninduced66.234
SRR8749032Uninduced43.206

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root51.904
SRR8400027Control-Root35.838

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved