Gene detail information of Glyur000431s00018649.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G62300.12.00E-83WRKY family transcription factor
NRXP_007149982.10hypothetical protein PHAVU_005G116000g [Phaseolus vulgaris]
Swissprottr|Q9C519|WRKY6_ARATH9.00E-128WRKY transcription factor 6
trEMBLtr|V7BZA4|V7BZA4_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW21976.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00431120963123719-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000431s00018649.1PF03106.10WRKY3714251.90E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.031
SRR1783600control1.039
SRR1783602moderate drought stress1.102
SRR1811619moderate drought stress1.034

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.056
DRR006520Root Summer glycyrrhizin high producing strain0.056
DRR006521Root Winter glycyrrhizin high producing strain0.651
DRR006522Root Winter glycyrrhizin high producing strain0.679
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain2.358
DRR006526Leaf Summer glycyrrhizin high producing strain2.333

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.715
SRR2868004Drought Stress(Tissue:root)12.581
SRR2967015Control (Tissue:root)15.236

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.255
SRR9715740Leave34.169
SRR9715741Leave57.904
SRR9715739Root0.949
SRR9715742Root1.339
SRR9715743Root1.038

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.090
SRR8749028MeJA induced 9h114.292
SRR8749029MeJA induced 9h48.756
SRR8749030Uninduced150.590
SRR8749031Uninduced125.138
SRR8749032Uninduced71.633

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.986
SRR8400027Control-Root3.288

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved