Gene detail

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Gene detail information of Glyur000432s00027006.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G57830.1	2.00E-154	Leucine-rich repeat protein kinase family protein
NR	XP_004497940.1	0	PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Cicer arietinum]
COG	YP_001192956.1	1.00E-20	two component regulator [Flavobacterium johnsoniae UW101]
Swissprot	tr\|Q9C9N5\|Y1668_ARATH	5.00E-108	Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 (Precursor)
trEMBL	tr\|A0A072VIY0\|A0A072VIY0_MEDTR	0	LRR receptor-like kinase {ECO:0000313\|EMBL:KEH41571.1}

Sequence

Transcript Sequence

>Glyur000432s00027006.1
GTTAAGACCAATTCTAGAGTTGTGGTTGCTTTTGTTTCATTATTGGGAAGGGACGGGTTCAGGGTGTCGATGGAGTACCACCACCTTCCTCACTCTTCACACCTCCACATTCCCACAACACAACACCGTACGCTCTTCTTTTCCTTCTCCGCAACACCTCGTTGCCGCCTTACAAAACCAAGCAAACCAACCATGCCACCTCATCACCACCACCATGTCCACATCCGCGTGATCATTCTTNTGCTCTGCGTCTCCGTTTCCCTCACACTCAACTCCGACGGTCTCTCCTTACTGGCCCTAAAAGCCGCCATAGACGTGGACCCCACAGGCATCCTCGACTCGTGGTCCGACTCATCAACCACACCGTGCGAGTGGCCTGGAGTATCATGCAACGGCAACCACGACCGAGTCACCCAACTCGCCCTCCCATCAAAGGGCCTACGCGGTTACGTCCCCTCCGAATTGGGCCACCTCACTGAACTCCAGTTCCTTCGCCTCCCACACAACAACCTCACACGAACCATCCCTTCAACACTCTTCAACAACACCAACAACCTCCTCGTCGTCGACCTCTCCCACAACTCCCTCTCTGGCCCACTCCCACCCCTCACAAACACCCTCCTCCACGTGGATTTATCCTCCAACTTCCTCAACGGTACAATCCCCGAAACACTCTCTTCTCTCGTTTCCCTCGCCGGAACATTGAACCTCTCTCATAACCGCTTCTCCGGCGGGGTTCCGGCATCCCTCGGCGACCTACCTGTCNCCGTCAGTTTGGATCTCCGGGACAACAACCTCACCGGTGAAATCCCACAGGTTGGGTCCTTACTTAACCAGGGGCCCACCGCGTTTTCCGGGAATCCCGGACTTTGCGGGTTTCCGTTACGGAACCCTTGCCCGGAGGCACAGAAGCTTCCAGATGTTTTCCCCAACGATAATGACCCGGAGAACCCGAAACCGAACGCCATTCGGACCGGGCCGGTTCGCGAGGAGGGGATTCGGGGCGGGTCGTTTGGCGTTGTCGTGGCGGTTTTGGTCTCCGGCGCGTCGGTTGTTGCTGCGGTGGCTTTGTTGTCGGCGTGGGTTTTCCGGCGACGGCGGAGGTTGAATTCCGGCGAGGGGGAGAAGGGGAAGGTGGTGGTGGAGGGTGGNGAGGTGGGTTTCGGTGGGGAGGAGCAGAAGGGGAGGTTCGTGGTGGTTGATGAAGGGTTTGGGTTGGAGCTGGAGGATTTGTTGAGGGCTTCTGCTTATGTGGTTGGGAAGAGCAGGAGTGGGATCGTGTACAAGGTTGTTGGGGTCGGGAAGGGGTCGGTTGCGGCGTCGTCGGCGACGGTGGTGGCTGTCCGGCGGTTGAGTGAGGGCGATGGTGATGCCGCGTTGAGGTTCAAGGAGTTTGAGTACGAGGTGGAGGCTATTGGGAGGGTGCGCCATCCCAATGTGGTGCCTTTGAGAGCGTATTACTATGCAAGTGATGAGAAACTGCTCATCACTGATTTCATCCGCAATGGAAGCTTGCACACTGCATTGCATGCTGGGCCTTCCAATTCATTGCCACCACTATCATGGGCAGCAAGGTTGAAAATTGCTCAAGGAGCTGCAAGGGGGTTGATGTATATACACGAGTTTAGTGGTAGGAAGTATGTCCATGGCAACCTGAAATCAACGAAAATACTATTGGATGATGATCTTCATCCTTACATATCGGGTTTCGGACTTACTCGTCTTGGTTTGGGTACCATAAAGTCTACCACCACAACGGCACATAAGCGACAGAATTCAATTTCAAACCAGTCTATCATAGCCTCAGCAATGAATTCAAAAGTTGCTGCTTCCTCTAACAACTACTTGGCACCTGAGGTGCACATGGCTGGCGGAAAGTTCACTCAGAAATGTGATGTGTATTCTTTTGGAGTAGTGTTGTTGGAACTTTTGACAGGTCGGCTGCCGGATTTAGGACTGGAAAATGATCACAAGGAGCTAGAGAGTTTTGTGCGGAAAGCGTTCCGGGAGGAGCAGCCCTTGTCGGAGATTATAGACCCAGCACTTCTGCCTGAGGTTAATGCTAAAAGGCAAGTGGTTGCAGCATTTCATGTTGCACTAAACTGCACAGAACTTGATCCGGAATTGCGACCCAGAATGAGAACTGTGTCTGAGAACCTTGATCGCATCAAAATACAGTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00432	28754	34320	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.13.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000432s00027006.1	PF08263.7	LRRNT_2	90	131	1.30E-12
Glyur000432s00027006.1	PF00069.20	Pkinase	419	716	1.30E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.090
SRR1783600	control	5.099
SRR1783602	moderate drought stress	3.800
SRR1811619	moderate drought stress	3.594

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.920
DRR006520	Root Summer glycyrrhizin high producing strain	9.828
DRR006521	Root Winter glycyrrhizin high producing strain	0.051
DRR006522	Root Winter glycyrrhizin high producing strain	0.049
DRR006523	Root Summer glycyrrhizin low producing strain	3.295
DRR006524	Root Summer glycyrrhizin low producing strain	3.261
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.196
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.022

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	9.254
SRR2868004	Drought Stress(Tissue:root)	5.344
SRR2967015	Control (Tissue:root)	6.211

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	3.084
SRR9715740	Leave	0.772
SRR9715741	Leave	1.671
SRR9715739	Root	3.708
SRR9715742	Root	3.682
SRR9715743	Root	3.001

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.925
SRR8749028	MeJA induced 9h	0.697
SRR8749029	MeJA induced 9h	0.822
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.182

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	11.405
SRR8400027	Control-Root	13.054