Gene detail information of Glyur000432s00027008.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42280.1 | 5.00E-49 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_003519049.1 | 5.22E-170 | PREDICTED: transcription factor bHLH130-like [Glycine max] |
| Swissprot | tr|Q66GR3|BH130_ARATH | 7.00E-72 | Transcription factor bHLH130 |
| trEMBL | tr|I1JG31|I1JG31_SOYBN | 2.00E-170 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G29830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00432 | 44271 | 47850 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000432s00027008.1 | PF00010.21 | HLH | 322 | 361 | 1.60E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.650 |
| SRR1783600 | control | 6.799 |
| SRR1783602 | moderate drought stress | 12.609 |
| SRR1811619 | moderate drought stress | 12.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.175 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.582 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 89.141 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 87.535 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.320 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.593 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.736 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.240 |
| SRR2868004 | Drought Stress(Tissue:root) | 11.962 |
| SRR2967015 | Control (Tissue:root) | 14.930 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.238 |
| SRR9715740 | Leave | 10.986 |
| SRR9715741 | Leave | 9.742 |
| SRR9715739 | Root | 1.554 |
| SRR9715742 | Root | 7.699 |
| SRR9715743 | Root | 6.998 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.733 |
| SRR8749028 | MeJA induced 9h | 11.484 |
| SRR8749029 | MeJA induced 9h | 7.425 |
| SRR8749030 | Uninduced | 15.706 |
| SRR8749031 | Uninduced | 17.957 |
| SRR8749032 | Uninduced | 12.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.103 |
| SRR8400027 | Control-Root | 7.006 |