Gene detail information of Glyur000432s00027016.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06839.3 | 8.00E-151 | bZIP transcription factor family protein |
| NR | XP_004497935.1 | 0 | PREDICTED: transcription factor HBP-1b(c1)-like [Cicer arietinum] |
| Swissprot | tr|O24160|TGA21_TOBAC | 2.00E-122 | TGACG-sequence-specific DNA-binding protein TGA-2.1 |
| trEMBL | tr|K7LI97|K7LI97_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G11985.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00432 | 110604 | 118707 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bZIP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000432s00027016.1 | PF00170.16 | bZIP_1 | 233 | 268 | 2.00E-08 |
| Glyur000432s00027016.1 | PF14144.1 | DOG1 | 327 | 402 | 1.70E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.257 |
| SRR1783600 | control | 3.366 |
| SRR1783602 | moderate drought stress | 3.702 |
| SRR1811619 | moderate drought stress | 3.638 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.075 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.105 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 23.438 |
| SRR2868004 | Drought Stress(Tissue:root) | 36.945 |
| SRR2967015 | Control (Tissue:root) | 38.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.042 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.038 |
| SRR9715739 | Root | 1.572 |
| SRR9715742 | Root | 1.940 |
| SRR9715743 | Root | 2.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.233 |
| SRR8749028 | MeJA induced 9h | 18.470 |
| SRR8749029 | MeJA induced 9h | 7.082 |
| SRR8749030 | Uninduced | 20.604 |
| SRR8749031 | Uninduced | 35.852 |
| SRR8749032 | Uninduced | 9.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 18.360 |
| SRR8400027 | Control-Root | 11.061 |