Gene detail information of Glyur000433s00026966.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G69780.12.00E-76Homeobox-leucine zipper protein family
NRXP_004511225.14.29E-163PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Cicer arietinum]
Swissprottr|Q8LC03|ATB13_ARATH2.00E-109Homeobox-leucine zipper protein ATHB-13
trEMBLtr|V7C965|V7C965_PHAVU4.00E-163Uncharacterized protein {ECO:0000313|EMBL:ESW25815.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004334471847557+


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000433s00026966.1PF00046.24Homeobox781319.10E-16
Glyur000433s00026966.1PF02183.13HALZ1331763.70E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control214.117
SRR1783600control214.989
SRR1783602moderate drought stress202.819
SRR1811619moderate drought stress201.331

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain172.788
DRR006520Root Summer glycyrrhizin high producing strain169.897
DRR006521Root Winter glycyrrhizin high producing strain0.122
DRR006522Root Winter glycyrrhizin high producing strain0.117
DRR006523Root Summer glycyrrhizin low producing strain57.152
DRR006524Root Summer glycyrrhizin low producing strain56.633
DRR006525Leaf Summer glycyrrhizin high producing strain28.869
DRR006526Leaf Summer glycyrrhizin high producing strain28.613

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.542
SRR2868004Drought Stress(Tissue:root)23.734
SRR2967015Control (Tissue:root)35.100

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.140
SRR9715740Leave24.627
SRR9715741Leave14.972
SRR9715739Root12.779
SRR9715742Root26.970
SRR9715743Root27.468

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.076
SRR8749028MeJA induced 9h0.074
SRR8749029MeJA induced 9h0.166
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root108.813
SRR8400027Control-Root140.478

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved