Gene detail information of Glyur000433s00026970.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G02820.24.00E-134myb domain protein 88
NRXP_003519765.10PREDICTED: pre-mRNA-splicing factor CEF1-like isoform X1 [Glycine max]
Swissprottr|Q9S7L2|MYB98_ARATH4.00E-20Transcription factor MYB98
trEMBLtr|I1JBN1|I1JBN1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G02310.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0043399972106489+


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000433s00026970.4PF00249.26Myb_DNA-binding56973.90E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.435
SRR1783600control11.384
SRR1783602moderate drought stress15.638
SRR1811619moderate drought stress15.473

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.247
DRR006520Root Summer glycyrrhizin high producing strain19.783
DRR006521Root Winter glycyrrhizin high producing strain6.242
DRR006522Root Winter glycyrrhizin high producing strain5.429
DRR006523Root Summer glycyrrhizin low producing strain12.784
DRR006524Root Summer glycyrrhizin low producing strain13.163
DRR006525Leaf Summer glycyrrhizin high producing strain9.493
DRR006526Leaf Summer glycyrrhizin high producing strain9.565

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.303
SRR2868004Drought Stress(Tissue:root)18.036
SRR2967015Control (Tissue:root)17.328

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.161
SRR9715740Leave10.053
SRR9715741Leave9.015
SRR9715739Root0.688
SRR9715742Root3.738
SRR9715743Root2.776

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.761
SRR8749028MeJA induced 9h9.162
SRR8749029MeJA induced 9h2.787
SRR8749030Uninduced11.497
SRR8749031Uninduced5.849
SRR8749032Uninduced1.565

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.660
SRR8400027Control-Root14.809

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved