Gene detail

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Gene detail information of Glyur000436s00018442.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G24940.1	2.00E-141	SUMO-activating enzyme 1A
NR	KHN16852.1	0	SUMO-activating enzyme subunit 1B [Glycine soja]
COG	YP_008431539.1	3.00E-13	hypothetical protein N186_00685 [Thermofilum sp. 1910b]
Swissprot	tr\|Q8VY78\|SAE1A_ARATH	1.00E-177	SUMO-activating enzyme subunit 1A
trEMBL	tr\|I1K6P0\|I1K6P0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G38190.3}

Sequence

Transcript Sequence

>Glyur000436s00018442.1
GACTCAATTCACATTCACCGAAAATTCCCCTGGGCGCGCCCTTGGACTGAGATACGAATTTTCAGCGTTTAAGGGGAAATTCAGCGCGACTAGCTGTTTGTCTGTTACGGTTGCGGCTGGGAATGGACGGCGACGGCGAGGAGTTGACGGCGCAGGAGACCGCTCTGTATGACCGTCAGATTAGGGTTTGGGGAGCAGATGCTCAAAGAAGACTAAGCAAAGCTCATGTCCTAGTTCATGGAATGAAAGGAACTGTAGCTGAGTTTTGCAAAAATATCGTTCTGGCTGGAGTAGGTAGTCTGACCTTAATAGATGATCGGCTGGTCACTGAGGAAGCACTTTCCTCGAACTTTCTCATTCCTCCTGATGAGAGTGAATATAGTGGAAAGACCCTTGCTCAGCTTTGTTGTAATTCACTTAAAGACTTCAATCCTATGGTTCGTGTTTCTGTGGAAAAAGGTGATTTGTCAAGTTTCGATGTAGAATTCTTCAGCAAGTTTGATGTTGTCGTCGTCAGTTGTTGCTCACTTTCAGCTAAAAAACTGGCCAATGACAAATGCCGGAAGGTATCAAAACGAATAGCATTTTATACTGTTGACTGTAGGGATTCTTGTGGTGAAATTTTTGTTGATCTGCAGGACTATAAATATTCAAAGAAAAAAATGGAGGAAACTGTCGAATGCCACCTAAAATATCCAAGTTTTGAGTATTCATTATCAGTACCTTGGAGGGCACTTCACAGGAGAATGTCAAAGCTGTACTTCGCAATGAGAGTAATAGAGAAGTTTGAAGAGGCTGAAGGACGTAGTGTGGGAGAAGTTTCGATTGCAGATCTTTCTGGTGTTCTCAAGCTGAAGAAGGAGCTTTGTACTGCACAATCTCTCAATGAATCTCATGTGCCCGATACTCTTCTAGAAAGATTGGTGGCAAATACAACAGAATTTCCTCCAGTTTGTGCTATTATCGGAGGAATCCTTGGACAGGAGGTTATCAAAGCAATTTCTGGGAAAGGAGANCCCCTGAAAAACTTTTTCTTTTTTGATGCTTTTGATGGAAAGGGCATTATAGAAGACATCTCAGATTCAAAATGTTAAAAGTGAATGGCATCTCTGGGAAAGTGTTTCATGTCCGAGGCGCCAGCAATCTGGAGTGGGGATGAANCATTTGCAAAAATAGCACAGAAAACTAGTAAATTTCAACAGCTCTCGGGTAGGAAACTGATCAATTAAGTGGACTAACTTCTGCCTTATTAACTGCCCATTTATAGTTGCTTATTTATTTAGGCTATTGACAATTTGGAATGTAGACACTCAAATGTATGTATGCTTTGNACCATCAAATTATCCTCCACATCAAGTGTATGAAGTTATGAAGCCTCGTGATGGTTCTGAAATAAGCTCGTTTATGTTTAGGTTCTCTGGTGGGTAAACGTGATTAATT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00436	16971	20970	-

Gene family

Gene family	subfamily
Ubiquitin Family	ThiF

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K10684	UBLE1A, SAE1	EC:6.2.1.45	Ubiquitin mediated proteolysis	map04120

Gene Ontology

molecular_function
GO:0008641 small protein activating enzyme activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000436s00018442.1	PF00899.16	ThiF	33	155	2.00E-09

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.965
SRR1783600	control	14.123
SRR1783602	moderate drought stress	17.781
SRR1811619	moderate drought stress	17.992

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	22.640
DRR006520	Root Summer glycyrrhizin high producing strain	21.976
DRR006521	Root Winter glycyrrhizin high producing strain	60.473
DRR006522	Root Winter glycyrrhizin high producing strain	59.269
DRR006523	Root Summer glycyrrhizin low producing strain	39.279
DRR006524	Root Summer glycyrrhizin low producing strain	38.086
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.945
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.193

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	71.188
SRR2868004	Drought Stress(Tissue:root)	75.876
SRR2967015	Control (Tissue:root)	89.117

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	43.943
SRR9715740	Leave	52.747
SRR9715741	Leave	55.470
SRR9715739	Root	22.292
SRR9715742	Root	37.758
SRR9715743	Root	35.548

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	111.790
SRR8749028	MeJA induced 9h	49.060
SRR8749029	MeJA induced 9h	89.049
SRR8749030	Uninduced	73.752
SRR8749031	Uninduced	68.284
SRR8749032	Uninduced	85.591

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	57.509
SRR8400027	Control-Root	54.457