Gene detail information of Glyur000436s00018442.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G24940.12.00E-141SUMO-activating enzyme 1A
NRKHN16852.10SUMO-activating enzyme subunit 1B [Glycine soja]
COGYP_008431539.13.00E-13hypothetical protein N186_00685 [Thermofilum sp. 1910b]
Swissprottr|Q8VY78|SAE1A_ARATH1.00E-177SUMO-activating enzyme subunit 1A
trEMBLtr|I1K6P0|I1K6P0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G38190.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004361697120970-


Gene family

Gene familysubfamily
Ubiquitin FamilyThiF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10684UBLE1A, SAE1 EC:6.2.1.45 Ubiquitin mediated proteolysis map04120


Gene Ontology

molecular_function

GO:0008641  small protein activating enzyme activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000436s00018442.2PF00899.16ThiF421642.20E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.965
SRR1783600control14.123
SRR1783602moderate drought stress17.781
SRR1811619moderate drought stress17.992

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.640
DRR006520Root Summer glycyrrhizin high producing strain21.976
DRR006521Root Winter glycyrrhizin high producing strain60.473
DRR006522Root Winter glycyrrhizin high producing strain59.269
DRR006523Root Summer glycyrrhizin low producing strain39.279
DRR006524Root Summer glycyrrhizin low producing strain38.086
DRR006525Leaf Summer glycyrrhizin high producing strain15.945
DRR006526Leaf Summer glycyrrhizin high producing strain16.193

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)71.188
SRR2868004Drought Stress(Tissue:root)75.876
SRR2967015Control (Tissue:root)89.117

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave43.943
SRR9715740Leave52.747
SRR9715741Leave55.470
SRR9715739Root22.292
SRR9715742Root37.758
SRR9715743Root35.548

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h111.790
SRR8749028MeJA induced 9h49.060
SRR8749029MeJA induced 9h89.049
SRR8749030Uninduced73.752
SRR8749031Uninduced68.284
SRR8749032Uninduced85.591

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root57.509
SRR8400027Control-Root54.457

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved