Gene detail information of Glyur000436s00018450.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12780.15.00E-179UDP-D-glucose/UDP-D-galactose 4-epimerase 1
NRXP_004503750.10PREDICTED: UDP-glucose 4-epimerase-like [Cicer arietinum]
COGYP_007424961.12.00E-138UDP-glucose 4-epimerase [Bacillus thuringiensis serovar kurstaki str. HD73]
Swissprottr|B0M3E8|UGE1_PEA0Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1
trEMBLtr|C6T9D7|C6T9D7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G38120.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004366295867134-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01784galE, GALE EC:5.1.3.2 Galactose metabolism map00052
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006012  galactose metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0003978  UDP-glucose 4-epimerase activity

GO:0050662  coenzyme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000436s00018450.1PF01370.16Epimerase82876.50E-44
Glyur000436s00018450.1PF13950.1Epimerase_Csub3073685.00E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.818
SRR1783600control4.880
SRR1783602moderate drought stress7.423
SRR1811619moderate drought stress7.289

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.430
DRR006520Root Summer glycyrrhizin high producing strain8.632
DRR006521Root Winter glycyrrhizin high producing strain36.265
DRR006522Root Winter glycyrrhizin high producing strain35.008
DRR006523Root Summer glycyrrhizin low producing strain14.289
DRR006524Root Summer glycyrrhizin low producing strain14.604
DRR006525Leaf Summer glycyrrhizin high producing strain15.230
DRR006526Leaf Summer glycyrrhizin high producing strain15.149

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.605
SRR2868004Drought Stress(Tissue:root)53.388
SRR2967015Control (Tissue:root)86.481

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave46.989
SRR9715740Leave26.905
SRR9715741Leave56.112
SRR9715739Root5.609
SRR9715742Root13.825
SRR9715743Root10.598

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h61.756
SRR8749028MeJA induced 9h156.859
SRR8749029MeJA induced 9h99.654
SRR8749030Uninduced44.256
SRR8749031Uninduced309.650
SRR8749032Uninduced209.613

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.470
SRR8400027Control-Root15.477

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved