Gene detail information of Glyur000439s00019014.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G48570.10FKBP-type peptidyl-prolyl cis-trans isomerase family protein
NRXP_004510236.10PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Cicer arietinum]
COGYP_007057296.16.00E-35FKBP-type peptidyl-prolyl cis-trans isomerase [Rivularia sp. PCC 7116]
Swissprottr|Q38931|FKB62_ARATH0Peptidyl-prolyl cis-trans isomerase FKBP62
trEMBLtr|V7ALP9|V7ALP9_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW06155.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00439108437112560-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09571FKBP4_5 EC:5.2.1.8 Estrogen signaling pathway map04915


Gene Ontology

biological_process

GO:0006457  protein folding


molecular_function

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000439s00019014.1PF00254.23FKBP_C561461.70E-34
Glyur000439s00019014.1PF00254.23FKBP_C1722632.10E-17
Glyur000439s00019014.1PF00254.23FKBP_C2883851.70E-20
Glyur000439s00019014.1PF07719.12TPR_24114330.02
Glyur000439s00019014.1PF13414.1TPR_114605195.30E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control36.842
SRR1783600control37.037
SRR1783602moderate drought stress24.888
SRR1811619moderate drought stress24.615

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain104.685
DRR006520Root Summer glycyrrhizin high producing strain104.329
DRR006521Root Winter glycyrrhizin high producing strain16.732
DRR006522Root Winter glycyrrhizin high producing strain16.287
DRR006523Root Summer glycyrrhizin low producing strain102.724
DRR006524Root Summer glycyrrhizin low producing strain101.326
DRR006525Leaf Summer glycyrrhizin high producing strain15.721
DRR006526Leaf Summer glycyrrhizin high producing strain15.786

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)70.766
SRR2868004Drought Stress(Tissue:root)32.172
SRR2967015Control (Tissue:root)30.900

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.364
SRR9715740Leave43.801
SRR9715741Leave39.512
SRR9715739Root2.148
SRR9715742Root24.591
SRR9715743Root21.823

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.306
SRR8749028MeJA induced 9h21.388
SRR8749029MeJA induced 9h10.892
SRR8749030Uninduced2.264
SRR8749031Uninduced0.226
SRR8749032Uninduced2.903

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root58.577
SRR8400027Control-Root60.175

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved