Gene detail information of Glyur000439s00019020.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07310.1 | 4.00E-90 | Protein of unknown function (DUF760) |
| NR | XP_004510240.1 | 0 | PREDICTED: uncharacterized protein LOC101489146 [Cicer arietinum] |
| trEMBL | tr|I1JM64|I1JM64_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G21620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00439 | 142680 | 146200 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000439s00019020.1 | PF05542.6 | DUF760 | 138 | 267 | 4.10E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.756 |
| SRR1783600 | control | 29.784 |
| SRR1783602 | moderate drought stress | 68.101 |
| SRR1811619 | moderate drought stress | 68.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.765 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.488 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 75.030 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 72.090 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.879 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.365 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 58.617 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 57.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 29.613 |
| SRR2868004 | Drought Stress(Tissue:root) | 58.898 |
| SRR2967015 | Control (Tissue:root) | 85.719 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 39.549 |
| SRR9715740 | Leave | 55.435 |
| SRR9715741 | Leave | 61.862 |
| SRR9715739 | Root | 19.321 |
| SRR9715742 | Root | 35.055 |
| SRR9715743 | Root | 32.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.175 |
| SRR8749028 | MeJA induced 9h | 9.494 |
| SRR8749029 | MeJA induced 9h | 1.662 |
| SRR8749030 | Uninduced | 15.915 |
| SRR8749031 | Uninduced | 6.434 |
| SRR8749032 | Uninduced | 4.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 26.568 |
| SRR8400027 | Control-Root | 34.687 |